DrJesse M. Rubenstein

(he/him)

Associate Research Fellow

Faculty of Science Engineering and Built Environment/School of Life and Environmental Sciences

  • Associate Research Fellow
    Faculty of Science Engineering and Built Environment/School of Life and Environmental Sciences
  • Geelong Waurn Ponds Campus, 75 Pigdons Road, Waurn Ponds, Victoria 3216

BIO

I am a quantitative ecologist specialising in avian movement ecology, wildlife disease and biosecurity. As part of the AviFluMap project in Marcel Klaassen’s group, I model how wild waterbirds and seabirds move across Australia and what this means for the spread of high pathogenicity avian influenza (HPAI) H5N1. This work aims to understand how the virus could spread through the movements and interactions of wild bird communities, identify the species and regions at greatest risk, and inform practical strategies for surveillance and mitigation.

 

I draw on spatial modelling, species distribution models, Bayesian and hierarchical statistics and citizen science to turn large tracking and surveillance datasets into results that wildlife managers and policy makers can use. Citizen science is a particular passion of mine. Having used eBird since 2009, and in my research for over a decade, I am keen to combine eBird and other citizen science data with tracking and surveillance data to better understand bird distributions, movements and disease risk at continental scales.

 

Before joining Deakin, I completed a PhD at Lincoln University, New Zealand, on biosecurity and invasion biology in the crop seed industry, focusing on the movement of weed seeds through the global seed trade and on emerging trends in herbicide resistant weeds affecting the sector. This work was carried out in close collaboration with government agencies, international seed testing authorities and industry to support evidence based biosecurity decisions.

 

I also hold master’s degrees in Geographic Information Science (University at Buffalo) and Environmental Science (Rochester Institute of Technology), where I combined habitat suitability models with eBird data to map habitat for declining songbirds such as the Golden-winged Warbler. My earlier roles include a faculty appointment teaching GIS and eBird workshops at the University of Connecticut, and leading avian surveys in Ecuador’s cloud forests that contributed to a landmark rights of nature case halting mining at Los Cedros Biological Reserve.

DEAKIN UNIVERSITY CURRENT APPOINTMENT

  • Associate Research Fellow
    Deakin University, School of Life and Environmental Sciences

ACADEMIC POSITIONS

  • Visiting Assistant Extension Educator
    University of Connecticut, Center for Land Use Education and Research, Storrs, United States1 Mar 2018 - 31 Aug 2019

NON-ACADEMIC POSITIONS

  • Biosecurity Data Scientist
    Seed Industry Research Centre, Christchurch, New Zealand1 Sep 2025 - 30 Jun 2026
  • Program Coordinator
    Better Border Biosecurity (B3), New Zealand1 Sep 2022 - 31 Aug 2023
  • Postgraduate Tutor/Teaching Assistant (Advanced GIS)
    Lincoln University, School of Landscape Architecture, Lincoln, New Zealand1 Feb 2020 - 30 Jun 2020
  • Geospatial Educator
    University at Buffalo, State University of New York, Geo-Technology Experiences for Students & Teachers, Buffalo, United States1 Jun 2017 - 31 Jul 2017
  • Avian Research Team Leader
    Los Cedros Biological Reserve, Gualimán, Ecuador1 Feb 2016 - 31 Mar 2016
  • Community Teacher
    Rochester Brainery, Rochester, United States1 May 2014 - 31 Dec 2016
  • Avian Research Assistant
    Bird Conservancy of the Rockies, Fort Collins, United States1 Apr 2014 - 31 Aug 2015
  • Postgraduate Tutor/Teaching Assistant (Biology 101)
    Rochester Institute of Technology, School of Life Sciences, Rochester, United States1 Aug 2013 - 31 Dec 2013
  • Avian Research Assistant
    Project Puffin, Audubon Seabird Institute, Bremen, United States1 Jun 2011 - 1 Jul 2011

DEGREES

  • PhD, Ecology
    Lincoln University, Lincoln, New Zealand2025
  • MS, Geographic Information Science
    University at Buffalo, State University of New York, Buffalo, United States2017
  • MS, Environmental Science
    Rochester Institute of Technology, Rochester, United States2016
  • BA, Biology
    D’Youville University, Buffalo, United States2012

LANGUAGES

  • English
    Can read, write, speak, understand and peer review
  • Spanish - Latin American
    Can speak and understand

FIELDS OF RESEARCH

  • Biosecurity science and invasive species ecology
  • Epidemiological modelling
  • Geospatial information systems and geospatial data modelling
  • Data models, storage and indexing
  • Applied statistics
  • Population ecology

AREA/FACULTY

  • Faculty of Science Engineering and Built Environment

DEPARTMENT/SCHOOL/INSTITUTE/DISCIPLINE

  • School of Life and Environmental Sciences

AREAS OF EXPERTISE