DrJesse M. Rubenstein

(he/him)

Associate Research Fellow

Faculty of Science Engineering and Built Environment/School of Life and Environmental Sciences

  • Associate Research Fellow
    Faculty of Science Engineering and Built Environment/School of Life and Environmental Sciences
  • Geelong Waurn Ponds Campus, 75 Pigdons Road, Waurn Ponds, Victoria 3216

BIO

I am a quantitative ecologist specialising in avian movement ecology, wildlife disease and biosecurity. In Marcel Klaassen’s lab, I am developing spatial models for the next phase of AviFluMap, assessing the risk that high pathogenicity avian influenza (HPAI) H5N1 poses to Australia’s wild birds. My work focuses on how waterbirds and seabirds move and interact across the continent, how the virus could spread through these communities, and which species and regions are most at risk, to help target surveillance and mitigation.

 

My research draws on spatial modelling, species distribution models, Bayesian and hierarchical statistics and citizen science to turn large tracking and surveillance datasets into practical insights for wildlife managers, policy makers and other stakeholders. Citizen science is a particular passion of mine. Having used eBird since 2009, and in my research for over a decade, I am keen to combine eBird and other citizen science data with tracking and surveillance data to better understand bird distributions, movements and disease risk at continental scales.

 

Before joining Deakin, I completed a PhD in ecology at Lincoln University, New Zealand, on biosecurity risks from invasive and herbicide resistant weeds in the global crop seed trade. I analysed large scale national and international seed inspection datasets to identify persistent and emerging threats, working closely with government agencies, international seed testing authorities and industry to inform regulation and inspection protocols.

 

I also hold master’s degrees in Geographic Information Science (University at Buffalo) and Environmental Science (Rochester Institute of Technology), where I integrated eBird data into habitat suitability models for declining songbirds such as the Golden-winged Warbler (Vermivora chrysoptera). My earlier roles include teaching GIS and eBird workshops through a faculty appointment at the University of Connecticut, coordinating postgraduate programmes for Better Border Biosecurity (B3) in New Zealand, and conducting avian field research across the Americas, including leading surveys in Ecuador’s cloud forests that contributed to a landmark rights of nature case halting mining at Los Cedros Biological Reserve.

DEAKIN UNIVERSITY CURRENT APPOINTMENT

  • Associate Research Fellow
    Deakin University, School of Life and Environmental Sciences

ACADEMIC POSITIONS

  • Visiting Assistant Extension Educator
    University of Connecticut, Center for Land Use Education and Research, Storrs, United States2018 - 2019

NON-ACADEMIC POSITIONS

  • Biosecurity Data Scientist
    Seed Industry Research Centre, Christchurch, New Zealand2025 - 2026
  • Program Coordinator
    Better Border Biosecurity (B3), New Zealand2022 - 2023
  • Postgraduate Tutor/Teaching Assistant (Advanced GIS)
    Lincoln University, School of Landscape Architecture, Lincoln, New Zealand2020 - 2020
  • Geospatial Educator
    University at Buffalo, State University of New York, Geo-Technology Experiences for Students & Teachers, Buffalo, United States2017 - 2017
  • Avian Research Team Leader
    Los Cedros Biological Reserve, Gualimán, Ecuador2016 - 2016
  • Community Teacher
    Rochester Brainery, Rochester, United States2014 - 2016
  • Avian Research Assistant
    Bird Conservancy of the Rockies, Fort Collins, United States2014 - 2015
  • Postgraduate Tutor/Teaching Assistant (Biology 101)
    Rochester Institute of Technology, School of Life Sciences, Rochester, United States2013 - 2013
  • Avian Research Assistant
    Project Puffin, Audubon Seabird Institute, Bremen, United States2011 - 2011

DEGREES

  • PhD, Ecology
    Lincoln University, Lincoln, New Zealand
  • MS, Geographic Information Science
    University at Buffalo, State University of New York, Buffalo, United States
  • MS, Environmental Science
    Rochester Institute of Technology, Rochester, United States
  • BA, Biology
    D’Youville University, Buffalo, United States

LANGUAGES

  • English
    Can read, write, speak, understand and peer review
  • Spanish - Latin American
    Can speak and understand

FIELDS OF RESEARCH

  • Biosecurity science and invasive species ecology
  • Epidemiological modelling
  • Geospatial information systems and geospatial data modelling
  • Data models, storage and indexing
  • Applied statistics
  • Population ecology

AREA/FACULTY

  • Faculty of Science Engineering and Built Environment

DEPARTMENT/SCHOOL/INSTITUTE/DISCIPLINE

  • School of Life and Environmental Sciences

AREAS OF EXPERTISE